STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106602021acyl-CoA synthetase family member 2, mitochondrial-like isoform X1. (460 aa)    
Predicted Functional Partners:
aasdh
acyl-CoA synthetase family member 4 isoform X1.
  
 0.901
mrpl3
39S ribosomal protein L3, mitochondrial; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.897
mrpl46
39S ribosomal protein L46, mitochondrial.
    
   0.891
mrpl43
39S ribosomal protein L43, mitochondrial.
    
   0.891
ENSSSAP00000028410
annotation not available
   
 0.890
sod2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.878
LOC106613497
39S ribosomal protein L47, mitochondrial-like.
    
   0.814
LOC106605701
39S ribosomal protein L17, mitochondrial-like isoform X1; Belongs to the bacterial ribosomal protein bL17 family.
    
   0.814
LOC106569871
Probable 39S ribosomal protein L24, mitochondrial isoform X1; Belongs to the universal ribosomal protein uL24 family.
    
   0.814
LOC106587095
39S ribosomal protein L21, mitochondrial-like isoform X1.
    
   0.814
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.