LOC106610329 protein (Salmo salar) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC106610329

cAMP-dependent protein kinase type I-alpha regulatory subunit isoform X2. (444 aa)

Predicted Functional Partners:

LOC106603515

0.761

LOC106567970

0.761

ENSSSAP00000000311

0.760

LOC106599750

0.760

LOC106593376

0.760

LOC106606839

0.760

ENSSSAP00000066625

0.760

prkacb

0.760

LOC106574269

0.760

LOC106569146

0.760

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSSAP00000000311	LOC106567970	ENSSSAP00000000311	ENSSSAP00000073346	CAMP-dependent protein kinase catalytic subunit alpha-like.	A-kinase anchor protein 10, mitochondrial-like isoform X1.	0.653
ENSSSAP00000000311	LOC106603515	ENSSSAP00000000311	ENSSSAP00000003399	CAMP-dependent protein kinase catalytic subunit alpha-like.	A-kinase anchor protein 10, mitochondrial-like.	0.653
ENSSSAP00000000311	LOC106610329	ENSSSAP00000000311	ENSSSAP00000003073	CAMP-dependent protein kinase catalytic subunit alpha-like.	cAMP-dependent protein kinase type I-alpha regulatory subunit isoform X2.	0.760
ENSSSAP00000066625	LOC106567970	ENSSSAP00000066625	ENSSSAP00000073346	Protein kinase X-linked.	A-kinase anchor protein 10, mitochondrial-like isoform X1.	0.653
ENSSSAP00000066625	LOC106603515	ENSSSAP00000066625	ENSSSAP00000003399	Protein kinase X-linked.	A-kinase anchor protein 10, mitochondrial-like.	0.653
ENSSSAP00000066625	LOC106610329	ENSSSAP00000066625	ENSSSAP00000003073	Protein kinase X-linked.	cAMP-dependent protein kinase type I-alpha regulatory subunit isoform X2.	0.760
LOC106567970	ENSSSAP00000000311	ENSSSAP00000073346	ENSSSAP00000000311	A-kinase anchor protein 10, mitochondrial-like isoform X1.	CAMP-dependent protein kinase catalytic subunit alpha-like.	0.653
LOC106567970	ENSSSAP00000066625	ENSSSAP00000073346	ENSSSAP00000066625	A-kinase anchor protein 10, mitochondrial-like isoform X1.	Protein kinase X-linked.	0.653
LOC106567970	LOC106569146	ENSSSAP00000073346	ENSSSAP00000117384	A-kinase anchor protein 10, mitochondrial-like isoform X1.	cAMP-dependent protein kinase catalytic subunit beta isoform X2; Belongs to the protein kinase superfamily.	0.653
LOC106567970	LOC106574269	ENSSSAP00000073346	ENSSSAP00000109990	A-kinase anchor protein 10, mitochondrial-like isoform X1.	cAMP-dependent protein kinase catalytic subunit PRKX-like; Belongs to the protein kinase superfamily.	0.653
LOC106567970	LOC106593376	ENSSSAP00000073346	ENSSSAP00000011355	A-kinase anchor protein 10, mitochondrial-like isoform X1.	cAMP-dependent protein kinase catalytic subunit alpha-like.	0.653
LOC106567970	LOC106599750	ENSSSAP00000073346	ENSSSAP00000007183	A-kinase anchor protein 10, mitochondrial-like isoform X1.	cAMP-dependent protein kinase catalytic subunit beta-like isoform X2; Belongs to the protein kinase superfamily.	0.653
LOC106567970	LOC106606839	ENSSSAP00000073346	ENSSSAP00000055275	A-kinase anchor protein 10, mitochondrial-like isoform X1.	cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily.	0.653
LOC106567970	LOC106610329	ENSSSAP00000073346	ENSSSAP00000003073	A-kinase anchor protein 10, mitochondrial-like isoform X1.	cAMP-dependent protein kinase type I-alpha regulatory subunit isoform X2.	0.761
LOC106567970	prkacb	ENSSSAP00000073346	ENSSSAP00000078531	A-kinase anchor protein 10, mitochondrial-like isoform X1.	cAMP-dependent protein kinase catalytic subunit beta isoform X2; Belongs to the protein kinase superfamily.	0.653
LOC106569146	LOC106567970	ENSSSAP00000117384	ENSSSAP00000073346	cAMP-dependent protein kinase catalytic subunit beta isoform X2; Belongs to the protein kinase superfamily.	A-kinase anchor protein 10, mitochondrial-like isoform X1.	0.653
LOC106569146	LOC106603515	ENSSSAP00000117384	ENSSSAP00000003399	cAMP-dependent protein kinase catalytic subunit beta isoform X2; Belongs to the protein kinase superfamily.	A-kinase anchor protein 10, mitochondrial-like.	0.653
LOC106569146	LOC106610329	ENSSSAP00000117384	ENSSSAP00000003073	cAMP-dependent protein kinase catalytic subunit beta isoform X2; Belongs to the protein kinase superfamily.	cAMP-dependent protein kinase type I-alpha regulatory subunit isoform X2.	0.760
LOC106574269	LOC106567970	ENSSSAP00000109990	ENSSSAP00000073346	cAMP-dependent protein kinase catalytic subunit PRKX-like; Belongs to the protein kinase superfamily.	A-kinase anchor protein 10, mitochondrial-like isoform X1.	0.653
LOC106574269	LOC106603515	ENSSSAP00000109990	ENSSSAP00000003399	cAMP-dependent protein kinase catalytic subunit PRKX-like; Belongs to the protein kinase superfamily.	A-kinase anchor protein 10, mitochondrial-like.	0.653