STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106595232Dehydrogenase/reductase SDR family member 7C-B-like isoform X1. (333 aa)    
Predicted Functional Partners:
LOC106612796
Calfacilitin-like.
    
 
 0.703
TLCD1
Calfacilitin-like.
    
 
 0.703
cbr1
Carbonyl reductase [NADPH] 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.674
LOC106560815
C-factor-like isoform X1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.654
LOC106578833
C-factor-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.654
LOC106560829
Uncharacterized oxidoreductase YKL071W-like.
   
 
 0.654
rimbp2
RIMS-binding protein 2 isoform X4.
      
 0.643
RIMBP2
RIMS-binding protein 2 isoform X1.
      
 0.643
LOC106588673
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.600
rdh12
Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.599
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.