STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000003107ADP-ribosylation factor-like protein 16. (92 aa)    
Predicted Functional Partners:
LOC106560579
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta.
    
   0.505
pde6d
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta isoform X1.
    
   0.505
ENSSSAP00000037154
annotation not available
      
 0.475
LOC106604625
ADP-ribosylation factor-like protein 9.
    
 0.430
LOC106611631
ADP-ribosylation factor-like protein 9.
    
 0.430
LOC106613323
Signal recognition particle receptor subunit beta-like.
      
 0.414
LOC106581494
Signal recognition particle receptor subunit beta-like.
      
 0.414
ankrd37
Ankyrin repeat domain-containing protein 37.
    
 0.401
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.