STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000003131annotation not available (854 aa)    
Predicted Functional Partners:
ENSSSAP00000049913
Adenosine deaminase tRNA specific 3.
   
 0.976
TYMS
Thymidylate synthetase.
  
 
 0.850
tyms
Thymidylate synthase.
  
 
 0.850
nags
N-acetylglutamate synthase, mitochondrial.
    
  0.775
hddc2
HD domain-containing protein 2.
   
 
  0.769
LOC106604078
Uracil phosphoribosyltransferase homolog.
   
 0.720
ENSSSAP00000053177
annotation not available
   
 0.720
upp
Uracil phosphoribosyltransferase isoform X1.
   
 0.720
LOC106591566
Thymidine kinase.
    
 0.697
kith
Thymidine kinase.
    
 0.697
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.