STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106610308WD repeat-containing protein on Y chromosome-like isoform X2. (1052 aa)    
Predicted Functional Partners:
ENSSSAP00000001245
annotation not available
   
  0.415
FAM20A
Protein FAM20A-like.
   
  0.415
LOC106591397
Extracellular serine/threonine protein kinase FAM20C-like.
   
  0.415
ENSSSAP00000016249
Extracellular serine/threonine protein kinase FAM20C-like.
   
  0.415
ENSSSAP00000025386
Extracellular serine/threonine protein kinase FAM20C-like.
   
  0.415
fam20a
Pseudokinase FAM20A isoform X1.
   
  0.415
ENSSSAP00000044935
annotation not available
   
  0.415
LOC106613959
Glycosaminoglycan xylosylkinase isoform X1.
   
  0.415
LOC106584281
Glycosaminoglycan xylosylkinase-like.
   
  0.415
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.