STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSPT1Eukaryotic peptide chain release factor GTP-binding subunit ERF3A. (495 aa)    
Predicted Functional Partners:
ef-1g
Elongation factor 1-gamma.
   
 0.997
ENSSSAP00000065087
Eukaryotic translation elongation factor 1 gamma.
   
 0.997
LOC106605401
valine--tRNA ligase-like isoform X3; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.946
LOC106579727
valine--tRNA ligase-like isoform X2; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.946
LOC100194717
Eukaryotic peptide chain release factor subunit 1.
   
 0.875
LOC106603260
Eukaryotic peptide chain release factor subunit 1.
   
 0.875
LOC106611818
Eukaryotic peptide chain release factor subunit 1-like.
   
 0.875
LOC106568098
Eukaryotic peptide chain release factor subunit 1-like.
   
 0.875
mars
methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.867
LOC106569723
Elongation factor 1-delta-like isoform X1; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.854
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.