STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pick1Salmo salar PRKCA-binding protein (pick1), mRNA. (440 aa)    
Predicted Functional Partners:
GRIA2
Glutamate receptor 2-like isoform X2.
    
 0.969
GRIA2-2
Glutamate receptor 2 isoform X4.
    
 0.969
ccdc62
Coiled-coil domain-containing protein 62 isoform X1.
      
 0.884
LOC106564280
Tektin-4-like.
   
  
 0.800
spata16
Spermatogenesis-associated protein 16 isoform X1.
      
 0.799
ift20
Intraflagellar transport protein 20 homolog.
   
 0.784
DNAH17
Dynein heavy chain 17, axonemal isoform X1.
      
 0.743
LOC106575677
Tetraspanin-7-like.
     
 0.742
LOC106582149
Tetraspanin.
     
 0.742
LOC106574647
Tetraspanin.
     
 0.742
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.