STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106603066Eukaryotic translation initiation factor 1A, X-chromosomal-like; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (144 aa)    
Predicted Functional Partners:
rs15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.999
LOC106600817
Eukaryotic translation initiation factor 1 isoform X1.
   
 0.994
Fau
Small subunit ribosomal protein S30e.
   
 0.994
rs30
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.994
ENSSSAP00000052427
annotation not available
   
 0.994
ENSSSAP00000060568
annotation not available
   
 0.994
ubim
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.994
fau
annotation not available
   
 0.994
ENSSSAP00000113801
annotation not available
   
 0.994
LOC106564013
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 0.993
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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