STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106602057Coilin-like isoform X1. (708 aa)    
Predicted Functional Partners:
tgs1
Trimethylguanosine synthase.
   
 0.840
LOC106580157
Survival motor neuron protein 1-like.
    
 0.837
LOC106585806
Survival motor neuron protein 1-like.
    
 0.837
LOC106573928
Survival motor neuron protein-like isoform X2.
    
 0.806
LOC106603505
Nuclear receptor corepressor 1-like isoform X7.
   
 0.793
GPS2
G protein pathway suppressor 2.
   
 0.793
ENSSSAP00000020891
Nuclear receptor corepressor 2.
   
 0.793
selja
Selenoprotein Ja.
   
 0.793
ncor1
Nuclear receptor corepressor 1 isoform X8.
   
 0.793
crj1a
Crystallin J1A isoform X1.
   
 0.793
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.