STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam98bProtein FAM98B. (362 aa)    
Predicted Functional Partners:
cssa25h2orf49
Ashwin.
   
 0.964
ENSSSAP00000004382
annotation not available
    
 0.925
LOC106610620
UPF0568 protein C14orf166 homolog isoform X1.
    
 0.925
LOC106593293
ATP-dependent RNA helicase DDX1-like.
    
 0.925
LOC106603001
UPF0568 protein C14orf166 homolog.
    
 0.925
rtcb
RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.
    
 0.923
ENSSSAP00000065540
annotation not available
    
 0.923
kdm6a
Lysine-specific demethylase 6A isoform X1.
    
 0.885
UNC79
Protein unc-79 homolog.
    
 0.839
LOC106611001
Protein unc-79 homolog isoform X2.
    
 0.839
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.