STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sez6l2Seizure 6-like protein 2. (891 aa)    
Predicted Functional Partners:
kif22
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.613
LOC106600645
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1-like isoform X1.
     
 0.605
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
    
 
 0.600
pagr1
PAXIP1-associated glutamate-rich protein 1 isoform X2.
      
 0.593
LOC106600720
Glycerophosphodiester phosphodiesterase domain-containing protein 3-like.
   
 
 0.590
LOC106600749
Tumor suppressor candidate 5 homolog.
    
 0.528
ENSSSAP00000101766
annotation not available
    
 0.528
CORO1A
Coronin; Belongs to the WD repeat coronin family.
   
 
 0.520
ENSSSAP00000036733
Coronin, actin binding protein, 1A.
   
 
 0.520
LOC106583905
Protein yippee-like 3.
   
  
 0.513
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.