STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000003398annotation not available (141 aa)    
Predicted Functional Partners:
LOC106569947
Major histocompatibility complex class I-related gene protein-like; Belongs to the MHC class I family.
    
  0.517
LOC106588401
Class I histocompatibility antigen, F10 alpha chain-like; Belongs to the MHC class I family.
    
  0.517
LOC106585058
Tissue-type plasminogen activator-like.
    
  0.485
plau
Urokinase-type plasminogen activator.
    
  0.485
LOC106580425
Tissue-type plasminogen activator-like isoform X1.
    
  0.485
ENSSSAP00000048675
annotation not available
  
  0.451
ENSSSAP00000035220
annotation not available
  
  0.450
ENSSSAP00000028752
annotation not available
  
  0.447
ENSSSAP00000036195
annotation not available
  
  0.447
ENSSSAP00000065644
annotation not available
  
  0.447
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.