STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000003443annotation not available (66 aa)    
Predicted Functional Partners:
LOC106569947
Major histocompatibility complex class I-related gene protein-like; Belongs to the MHC class I family.
    
  0.517
LOC106588401
Class I histocompatibility antigen, F10 alpha chain-like; Belongs to the MHC class I family.
    
  0.517
LOC106585058
Tissue-type plasminogen activator-like.
    
  0.516
plau
Urokinase-type plasminogen activator.
    
  0.516
LOC106580425
Tissue-type plasminogen activator-like isoform X1.
    
  0.516
LOC106574335
LOW QUALITY PROTEIN: amyloid beta A4 protein-like.
    
 
 0.501
LOC106586687
Amyloid beta A4 protein-like isoform X1.
    
 
 0.501
LOC100194697-2
Uncharacterized protein LOC100194697 isoform X3.
  
 
   0.458
LOC106606764
Uncharacterized protein LOC106606764.
   
 0.445
ENSSSAP00000008346
annotation not available
   
 0.445
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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