STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
antkmtProtein FAM173A isoform X1. (223 aa)    
Predicted Functional Partners:
TR112
TRM112-like protein.
   
 0.643
ENSSSAP00000067342
annotation not available
   
 0.643
tsr3
Probable ribosome biogenesis protein tsr3; Probable pre-rRNA processing protein involved in ribosome biogenesis.
   
  
 0.624
mettl18
Histidine protein methyltransferase 1 homolog.
   
 
 0.611
ENSSSAP00000049872
Protein only RNase P catalytic subunit.
   
 
 0.609
prorp
Mitochondrial ribonuclease P protein 3 isoform X1.
   
 
 0.609
etfbkmt
Protein N-lysine methyltransferase METTL20.
    
 
 0.602
mettl23
LOW QUALITY PROTEIN: methyltransferase-like protein 23.
    
 
 0.600
vcpkmt
CN138 protein.
    
 
 0.600
rs15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
  0.599
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.