STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000003466Amnion associated transmembrane protein. (306 aa)    
Predicted Functional Partners:
cdcp2
CUB domain-containing protein 2.
   
 0.971
cubn
Cubilin.
   
 0.971
pcolce
Procollagen C-endopeptidase enhancer 1.
   
 0.825
pcolce2
Procollagen C-endopeptidase enhancer 2.
   
 0.825
LOC106590626
Procollagen C-endopeptidase enhancer 2-like.
   
 0.825
PCOC1
Procollagen C-endopeptidase enhancer 2-like.
   
 0.825
LOC106610241
CUB domain-containing protein 2-like.
   
 0.703
ENSSSAP00000013446
annotation not available
   
 0.703
LOC106590027
Neuropilin; Belongs to the neuropilin family.
   
 0.703
LOC106612628
Membrane frizzled-related protein-like isoform X1.
   
 0.703
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.