STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601736Interferon-induced protein 44-like. (247 aa)    
Predicted Functional Partners:
LOC106599567
UBX domain-containing protein 7-like isoform X1.
    
   0.891
LOC106568865
UBX domain-containing protein 7-like.
    
   0.891
ENSSSAP00000051367
annotation not available
   
 
 0.746
mrpl46
39S ribosomal protein L46, mitochondrial.
   
 
 0.744
mrpl3
39S ribosomal protein L3, mitochondrial; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.740
mrpl22
39S ribosomal protein L22, mitochondrial isoform X1; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.737
mrps10
28S ribosomal protein S10, mitochondrial.
   
 
 0.711
mrpl40
39S ribosomal protein L40, mitochondrial isoform X1.
   
 
 0.708
mrpl19
39S ribosomal protein L19, mitochondrial.
   
 
 0.708
mrpl43
39S ribosomal protein L43, mitochondrial.
   
   0.705
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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