ENSSSAP00000003619 protein (Salmo salar) - STRING interaction network

Nodes:

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

ENSSSAP00000003619

annotation not available (303 aa)

Predicted Functional Partners:

sf3b5

0.930

ncbp2

0.914

LOC106608594

0.890

LOC106577532

0.890

cdc5l

0.882

CDC5L

0.882

LOC106586372

0.869

LOC100380860

0.869

SF3B4

0.847

LOC106588579

0.847

Your Current Organism:

Salmo salar

NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC5L	ENSSSAP00000003619	ENSSSAP00000013649	ENSSSAP00000003619	Cell division cycle 5-like protein.	annotation not available	0.882
CDC5L	LOC100380860	ENSSSAP00000013649	ENSSSAP00000120205	Cell division cycle 5-like protein.	Splicing factor 3B subunit 1 isoform X1.	0.965
CDC5L	LOC106577532	ENSSSAP00000013649	ENSSSAP00000117047	Cell division cycle 5-like protein.	Splicing factor 1-like.	0.947
CDC5L	LOC106586372	ENSSSAP00000013649	ENSSSAP00000055787	Cell division cycle 5-like protein.	Splicing factor 3B subunit 1 isoform X1.	0.965
CDC5L	LOC106588579	ENSSSAP00000013649	ENSSSAP00000022534	Cell division cycle 5-like protein.	Splicing factor 3B subunit 4-like.	0.934
CDC5L	LOC106608594	ENSSSAP00000013649	ENSSSAP00000004652	Cell division cycle 5-like protein.	Splicing factor 1-like.	0.947
CDC5L	SF3B4	ENSSSAP00000013649	ENSSSAP00000015354	Cell division cycle 5-like protein.	Splicing factor 3B subunit 4-like.	0.934
CDC5L	cdc5l	ENSSSAP00000013649	ENSSSAP00000005071	Cell division cycle 5-like protein.	Cell division cycle 5-like protein.	0.900
CDC5L	ncbp2	ENSSSAP00000013649	ENSSSAP00000035933	Cell division cycle 5-like protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.977
CDC5L	sf3b5	ENSSSAP00000013649	ENSSSAP00000095013	Cell division cycle 5-like protein.	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	0.930
ENSSSAP00000003619	CDC5L	ENSSSAP00000003619	ENSSSAP00000013649	annotation not available	Cell division cycle 5-like protein.	0.882
ENSSSAP00000003619	LOC100380860	ENSSSAP00000003619	ENSSSAP00000120205	annotation not available	Splicing factor 3B subunit 1 isoform X1.	0.869
ENSSSAP00000003619	LOC106577532	ENSSSAP00000003619	ENSSSAP00000117047	annotation not available	Splicing factor 1-like.	0.890
ENSSSAP00000003619	LOC106586372	ENSSSAP00000003619	ENSSSAP00000055787	annotation not available	Splicing factor 3B subunit 1 isoform X1.	0.869
ENSSSAP00000003619	LOC106588579	ENSSSAP00000003619	ENSSSAP00000022534	annotation not available	Splicing factor 3B subunit 4-like.	0.847
ENSSSAP00000003619	LOC106608594	ENSSSAP00000003619	ENSSSAP00000004652	annotation not available	Splicing factor 1-like.	0.890
ENSSSAP00000003619	SF3B4	ENSSSAP00000003619	ENSSSAP00000015354	annotation not available	Splicing factor 3B subunit 4-like.	0.847
ENSSSAP00000003619	cdc5l	ENSSSAP00000003619	ENSSSAP00000005071	annotation not available	Cell division cycle 5-like protein.	0.882
ENSSSAP00000003619	ncbp2	ENSSSAP00000003619	ENSSSAP00000035933	annotation not available	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.914
ENSSSAP00000003619	sf3b5	ENSSSAP00000003619	ENSSSAP00000095013	annotation not available	Splicing factor 3B subunit 5; Belongs to the SF3B5 family.	0.930