STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106599530Glypican-1-like; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (558 aa)    
Predicted Functional Partners:
EXT2
Exostosin-2; Belongs to the glycosyltransferase 47 family.
     
 0.635
LOC106571235
Syndecan-1-like.
    
 0.584
LOC106582650
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.580
LOC106565017
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.580
hs2st
Heparan sulfate 2-O-sulfotransferase 1 isoform X1.
     
 0.562
LOC106560611
Heparan sulfate 2-O-sulfotransferase 1-like.
     
 0.562
LOC106598897
Heparan sulfate 2-O-sulfotransferase 1.
     
 0.562
ENSSSAP00000000671
Palmitoleoyl-protein carboxylesterase notum1a-like.
    
 0.556
ENSSSAP00000014330
annotation not available
    
 0.556
LOC106564593
Carboxylesterase notum2-like isoform X1.
    
 0.556
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.