STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nudt9ADP-ribose pyrophosphatase, mitochondrial isoform X1. (347 aa)    
Predicted Functional Partners:
LOC106609278
ADP-sugar pyrophosphatase-like isoform X1; Belongs to the Nudix hydrolase family.
    
 0.940
nudt5
ADP-sugar pyrophosphatase isoform X1.
    
 0.940
LOC106582587
Transient receptor potential cation channel subfamily M member 2-like.
     
 0.910
ENSSSAP00000053532
Ribose-phosphate pyrophosphokinase 1-like.
     
 0.909
prps2
Ribose-phosphate pyrophosphokinase 2.
     
 0.909
LOC106612209
Ribose-phosphate pyrophosphokinase 1-like isoform X2.
     
 0.909
pgm2
Phosphoglucomutase-2.
     
  0.900
PGM1
Phosphoglucomutase-1-like; Belongs to the phosphohexose mutase family.
     
  0.900
adprm
Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase.
     
  0.900
pgm1
Phosphoglucomutase 1; Belongs to the phosphohexose mutase family.
     
  0.900
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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