STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106589484Protein lin-52 homolog. (115 aa)    
Predicted Functional Partners:
LOC106577962
Protein lin-37 homolog.
    
 0.998
LOC106608031
Protein lin-9 homolog isoform X1.
    
 0.998
LIN9
Protein lin-9 homolog isoform X1.
    
 0.998
LOC106560967
Protein lin-54 homolog isoform X1.
    
 0.994
LOC106568323
Protein lin-54 homolog.
    
 0.994
LOC106562309
Protein lin-54 homolog.
    
 0.994
mybl2
Myb-related protein B isoform X2.
    
 0.990
LOC106565720
Myb-related protein B-like.
    
 0.990
rbbp4
Histone-binding protein RBBP4.
   
 0.987
LOC106570721
Histone-binding protein RBBP4-like.
   
 0.986
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.