STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106612836Isoaspartyl peptidase/L-asparaginase-like isoform X2. (310 aa)    
Predicted Functional Partners:
otc
Ornithine carbamoyltransferase, mitochondrial; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
     
 0.691
asl
Argininosuccinate lyase.
     
 0.664
LOC106588679
Actin-binding protein anillin-like isoform X2.
     
 0.634
LOC106570297
Asparagine synthetase [glutamine-hydrolyzing]-like.
     
 0.634
asnsd1
Asparagine synthetase domain-containing protein 1 isoform X1.
     
 0.591
ENSSSAP00000104915
annotation not available
     
 0.591
ENSSSAP00000087000
annotation not available
  
   
 0.515
LOC106605575
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase- like.
  
     0.510
LOC106607448
Mitochondrial dynamics protein MID51-like isoform X1.
      
 0.502
LOC106600887
Mitochondrial dynamics protein MID51.
      
 0.502
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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