STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601487Phosphoinositide-interacting protein-like. (134 aa)    
Predicted Functional Partners:
nrde2
Protein NRDE2 homolog isoform X1.
      
 0.557
LOC106611740
PCTP-like protein.
      
 0.422
LOC106604145
PCTP-like protein.
      
 0.422
LOC106612291
PCTP-like protein.
      
 0.422
LOC106613220
PCTP-like protein.
      
 0.422
LOC106581404
PCTP-like protein.
      
 0.422
LOC106604733
PCTP-like protein.
      
 0.422
LOC106567038
Golgin subfamily A member 2-like isoform X1.
      
 0.414
golga2
Golgin subfamily A member 2 isoform X1.
      
 0.414
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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