STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601238DNA-directed RNA polymerase III subunit RPC8-like isoform X1. (208 aa)    
Predicted Functional Partners:
RPAC2
DNA-directed RNA polymerases I and III subunit RPAC2.
  
 0.995
polr2h
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 0.994
crcp
DNA-directed RNA polymerase III subunit RPC9.
   
 0.994
polr3f
DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.
   
 0.989
ENSSSAP00000106688
Polymerase (RNA) III (DNA directed) polypeptide F.
   
 0.989
LOC106570789
DNA-directed RNA polymerases I, II, and III subunit RPABC4-like.
   
 0.986
LOC106569462
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
   
 0.986
LOC106573578
DNA-directed RNA polymerases I, II, and III subunit RPABC1-like.
   
 0.986
LOC106589136
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
   
 0.986
rpac1
DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1.
   
 0.985
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.