STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106611944Serine protease 27-like; Belongs to the peptidase S1 family. (345 aa)    
Predicted Functional Partners:
LOC106565756
Macrophage-stimulating protein receptor-like.
    
 0.691
LOC106573120
Hepatocyte growth factor receptor-like.
    
 0.691
ENSSSAP00000046816
Hepatocyte growth factor receptor-like.
    
 0.691
LOC106582756
Macrophage-stimulating protein receptor-like.
    
 0.691
LOC106561553
Hepatocyte growth factor receptor-like.
    
 0.691
LOC106582868
Macrophage-stimulating protein receptor-like.
    
 0.691
ENSSSAP00000022196
TBC1 domain family member 15.
      
 0.623
LOC106594572
TBC1 domain family member 15-like.
      
 0.623
emg1
Ribosomal RNA small subunit methyltransferase NEP1.
      
 0.623
ebi2
G-protein coupled receptor 183; G-protein coupled receptor expressed in lymphocytes that acts as a chemotactic receptor for B-cells, T-cells, splenic dendritic cells, monocytes/macrophages and astrocytes (By similarity). Receptor for oxysterol 7-alpha,25-dihydroxycholesterol (7-alpha,25-OHC) and other related oxysterols (By similarity). Mediates cell positioning and movement of a number of cells by binding the 7-alpha,25-OHC ligand that forms a chemotactic gradient (By similarity). Binding of 7-alpha,25-OHC mediates the correct localization of B-cells during humoral immune responses (B [...]
      
 0.550
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.