STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601005Cyclin-dependent kinase 12-like isoform X2. (1403 aa)    
Predicted Functional Partners:
LOC106571114
cyclin-K-like; Belongs to the cyclin family.
   
 0.961
ccnk
cyclin-K isoform X1; Belongs to the cyclin family.
   
 0.961
ENSSSAP00000043908
annotation not available
   
 0.961
ENSSSAP00000029810
annotation not available
   
 0.937
ENSSSAP00000057692
SPT5 homolog, DSIF elongation factor subunit.
    
 0.933
LOC106580766
Transcription elongation factor SPT5.
    
 0.933
LOC106608676
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.908
LOC106577550
DNA-directed RNA polymerase II subunit RPB1.
   
 0.908
ENSSSAP00000015966
annotation not available
   
 0.877
ENSSSAP00000094959
annotation not available
   
 0.877
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.