STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106604100Transcription termination factor 1-like isoform X2. (678 aa)    
Predicted Functional Partners:
twistnb
DNA-directed RNA polymerase I subunit RPA43.
    
 0.795
ENSSSAP00000040349
annotation not available
    
 0.788
ENSSSAP00000040415
annotation not available
    
 0.752
znrd1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.752
rpac1
DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1.
    
 0.728
LOC106576959
DNA-directed RNA polymerases I and III subunit RPAC1-like.
    
 0.728
LOC106601028
Polymerase I and transcript release factor-like.
    
 0.713
ENSSSAP00000018015
annotation not available
   
 
 0.713
LOC106607299
Polymerase I and transcript release factor-like.
    
 0.713
polr1b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.713
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.