STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106591430Ell-associated factor Eaf-like; Belongs to the PDGF/VEGF growth factor family. (674 aa)    
Predicted Functional Partners:
LOC106606462
Platelet-derived growth factor subunit A-like isoform X1; Belongs to the PDGF/VEGF growth factor family.
    
0.982
ENSSSAP00000089021
Platelet-derived growth factor C-like.
     
 0.972
pdgfc
Platelet-derived growth factor C isoform X1; Belongs to the PDGF/VEGF growth factor family.
     
 0.972
pdgfd
Platelet-derived growth factor D.
     
 0.970
PDGFRB
Platelet-derived growth factor receptor beta; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
 0.966
LOC106611876
Platelet-derived growth factor receptor beta-like isoform X1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
 0.966
PDGFRB-2
Platelet-derived growth factor receptor beta-like isoform X1; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
 0.966
LOC106560269
Platelet-derived growth factor receptor alpha-like; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
 0.928
LOC106579503
Receptor-type tyrosine-protein kinase FLT3-like; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
 0.928
LOC106590453
Receptor-type tyrosine-protein kinase FLT3-like; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
 0.928
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.