STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106591388Neutrophil cytosol factor 4-like. (334 aa)    
Predicted Functional Partners:
spd2b
SH3 and PX domain-containing protein 2B isoform X3.
   
 0.990
ncf1
SH3 and PX domain-containing protein 2A.
   
 0.990
LOC106579561
Neutrophil cytosol factor 2-like isoform X1.
   
 0.973
p67phox
NADPH oxidase cytosolic protein.
   
 0.973
noxa1
NADPH oxidase activator 1.
   
 0.965
ENSSSAP00000054699
Neutrophil cytosol factor 2-like.
   
 0.949
LOC106587384
Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.
   
 0.887
LOC106562274
Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.
   
 0.887
nox4
NADPH oxidase 4 isoform X1.
   
 0.730
nox5
NADPH oxidase 5.
   
 0.721
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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