STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000003926Alkylglycerol monooxygenase. (410 aa)    
Predicted Functional Partners:
pnmt
Phenylethanolamine N-methyltransferase.
      
 0.581
ALPK1
Alpha-protein kinase 1 isoform X2.
      
 0.570
ENSSSAP00000043665
4-hydroxysphinganine ceramide fatty acyl 2-hydroxylase.
   
  
 0.569
fa2h
Fatty acid 2-hydroxylase; Catalyzes stereospecific hydroxylation of free fatty acids at the C-2 position to produce (R)-2-hydroxy fatty acids, which are building blocks of sphingolipids and glycosphingolipids common in neural tissue and epidermis. Plays an essential role in the synthesis of galactosphingolipids of the myelin sheath. Responsible for the synthesis of sphingolipids and glycosphingolipids involved in the formation of epidermal lamellar bodies critical for skin permeability barrier. Participates in the synthesis of glycosphingolipids and a fraction of type II wax diesters i [...]
   
  
 0.569
LOC106609449
Phenylalanine-4-hydroxylase-like.
   
  
 0.521
LOC106575916
DNA annealing helicase and endonuclease ZRANB3-like isoform X1.
   
 
 0.496
LOC106591701
Interleukin-1 receptor accessory protein-like 1.
      
 0.463
spr
Sepiapterin reductase.
      
 0.432
ENSSSAP00000022035
Dihydropyrimidine dehydrogenase b.
   
  
 0.427
LOC106568897
Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.
   
  
 0.427
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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