STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106604788Testican-1-like isoform X2. (471 aa)    
Predicted Functional Partners:
LOC100196589
Somatolactin beta precursor.
    
 0.661
adam10
ADAM metallopeptidase domain 10.
     
 0.649
LOC106564475
alpha-2A adrenergic receptor-like.
   
  
 0.627
LOC106590134
alpha-2A adrenergic receptor-like.
   
  
 0.627
trpa1
Transient receptor potential cation channel subfamily A member 1; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.623
LOC106607462
Growth hormone 2.
    
 0.594
LOC100136491
Somatolactin precursor.
    
 0.594
LOC100136588
Somatotropin; Growth hormone plays an important role in growth control and is involved in the regulation of several anabolic processes. Implicated as an osmoregulatory substance important for seawater adaptation; Belongs to the somatotropin/prolactin family.
    
 0.594
ENSSSAP00000082258
annotation not available
    
 0.594
TPH1
Tryptophan 5-hydroxylase 1-like.
   
  
 0.515
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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