STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000003984annotation not available (498 aa)    
Predicted Functional Partners:
pex1
Peroxisome biogenesis factor 1 isoform X2.
  
0.997
pex14
Peroxisomal membrane protein PEX14.
    
 0.982
LOC106599567
UBX domain-containing protein 7-like isoform X1.
   
 0.970
LOC106568865
UBX domain-containing protein 7-like.
   
 0.970
ENSSSAP00000093913
annotation not available
    
 0.933
fam185a
Protein FAM185A.
    
 0.933
ENSSSAP00000017661
Peroxisomal biogenesis factor 26.
    
 0.911
LOC106609506
Peroxisome assembly protein 26-like.
    
 0.911
pex13
Peroxisomal membrane protein PEX13 isoform X1.
    
 0.900
PEX13
Peroxisomal biogenesis factor 13.
    
 0.900
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.