STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106611926Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma. (87 aa)    
Predicted Functional Partners:
LOC106568151
Phosphodiesterase.
   
 0.989
LOC106565989
Guanine nucleotide-binding protein G(T) subunit alpha-1.
   
 0.986
GNAT2
Guanine nucleotide-binding protein G(T) subunit alpha-2-like isoform X1.
   
 0.978
LOC106566369
Guanine nucleotide-binding protein G(T) subunit alpha-2-like.
   
 0.978
GNAT2-2
Guanine nucleotide-binding protein G(T) subunit alpha-2-like isoform X1.
   
 0.978
ENSSSAP00000106289
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.941
ENSSSAP00000016213
Phosphodiesterase 5A, cGMP-specific, b.
   
 0.927
LOC106577501
Phosphodiesterase.
   
 0.927
pde6a
Phosphodiesterase.
   
 0.912
ENSSSAP00000040205
Phosphodiesterase 6A, cGMP-specific, rod, alpha.
   
 0.912
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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