STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106611919Oxidoreductase-like domain-containing protein 1. (231 aa)    
Predicted Functional Partners:
LOC106567431
grpE protein homolog 2, mitochondrial-like isoform X2; Belongs to the GrpE family.
    
 
 0.630
LOC106603896
grpE protein homolog 2, mitochondrial-like; Belongs to the GrpE family.
    
 
 0.630
grpel1
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
    
 
 0.511
GRPEL1
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
    
 
 0.511
antkmt
Protein FAM173A isoform X1.
   
 
 0.499
lyrm9
LYR motif-containing protein 9; Belongs to the complex I LYR family.
      
 0.426
trmt61b
tRNA (Adenine(58)-N(1))-methyltransferase, mitochondrial.
    
   0.412
cars2
Probable cysteine--tRNA ligase, mitochondrial.
    
   0.404
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.