STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000004004Dual specificity phosphatase 22b. (90 aa)    
Predicted Functional Partners:
ENSSSAP00000090665
Chromosome 19 open reading frame 54.
      
 0.593
fam120b
Constitutive coactivator of peroxisome proliferator-activated receptor gamma isoform X1.
      
 0.571
MSTN1
Musculoskeletal embryonic nuclear protein 1.
    
 0.564
dusp11
RNA/RNP complex-1-interacting phosphatase isoform X1.
      
 0.476
gak
cyclin-G-associated kinase isoform X1.
    
 0.470
TMEM41B
Transmembrane protein 41B-like isoform X1.
   
  
 0.467
nmd3
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.463
nmd3-2
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.463
LOC106600714
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.453
MAPK12
Mitogen-activated protein kinase 12.
   
 0.453
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.