STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nap1Nef-associated protein 1 isoform X1. (649 aa)    
Predicted Functional Partners:
ankzf1
Ankyrin repeat and zinc finger domain-containing protein 1 isoform X1.
      
 0.596
ENSSSAP00000041660
Cytochrome c oxidase assembly factor COX18.
      
 0.495
LOC106611649
Mitochondrial inner membrane protein COX18.
      
 0.495
LOC106609718
Probable tRNA N6-adenosine threonylcarbamoyltransferase.
      
 0.487
gcp
Probable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. OSGEP likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity.
      
 0.487
LOC106576589
Probable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. OSGEP likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity.
      
 0.487
LOC106611794
tRNA wybutosine-synthesizing protein 2 homolog.
   
  
 0.485
LOC106609892
Vacuolar protein sorting-associated protein 37C-like isoform X2.
      
 0.468
LOC106590615
Mitochondrial import inner membrane translocase subunit Tim21-like isoform X1.
      
 0.468
LOC106602588
Vacuolar protein sorting-associated protein 37C-like.
      
 0.468
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.