STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSSAP00000004049Forkhead box protein C. (214 aa)    
Predicted Functional Partners:
LOC106573802
Forkhead box protein I2-A-like.
  
0.506
LOC106560889
Uncharacterized protein LOC106560889.
  
0.501
ENSSSAP00000025458
annotation not available
    
 0.491
hoxa5aa
Homeobox protein HoxA5aa.
    
 0.479
hoxa5ab
Homeobox protein Hox-A5; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family.
    
 0.479
LOC106604510
NAD-dependent protein deacetylase sirtuin-1-like isoform X2.
    
 0.445
sirt1
NAD-dependent protein deacetylase sirtuin-1.
    
 0.445
LOC106572627
Nuclear factor of activated T-cells, cytoplasmic 2-like isoform X3.
   
  
 0.442
LOC106567114
Nuclear factor of activated T-cells, cytoplasmic 2-like isoform X2.
   
  
 0.442
LOC106599723
NAD-dependent protein deacylase sirtuin-5, mitochondrial; NAD-dependent lysine demalonylase, desuccinylase and deglutarylase that specifically removes malonyl, succinyl and glutaryl groups on target proteins. Has weak NAD-dependent protein deacetylase activity; however this activity may not be physiologically relevant in vivo.
    
 0.428
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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