STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106599743Myosin light chain kinase 2, skeletal/cardiac muscle-like isoform X1. (840 aa)    
Predicted Functional Partners:
LOC106565219
Myosin regulatory light chain 2, smooth muscle isoform.
   
 0.941
LOC106567035
Myosin light polypeptide 6-like isoform X2.
   
 0.938
prkce
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 
 
0.908
LOC106589411
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 
 
0.908
LOC106578694
Myosin regulatory light chain 2, smooth muscle isoform.
   
 0.795
LOC106590146
Myosin regulatory light chain 2, smooth muscle isoform.
   
 0.795
myl7
Myosin regulatory light chain 2, atrial isoform.
   
 0.787
MYL7
Myosin regulatory light chain 2, atrial isoform-like.
   
 0.787
calm2-4
Calmodulin 2 (Phosphorylase kinase, delta)-1; Belongs to the calmodulin family.
   
 0.783
myl4
Myosin light polypeptide 4.
   
 0.773
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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