STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106605438semaphorin-4A-like; Belongs to the semaphorin family. (737 aa)    
Predicted Functional Partners:
LOC106565756
Macrophage-stimulating protein receptor-like.
    
 0.669
LOC106573120
Hepatocyte growth factor receptor-like.
    
 0.669
ENSSSAP00000046816
Hepatocyte growth factor receptor-like.
    
 0.669
LOC106582756
Macrophage-stimulating protein receptor-like.
    
 0.669
LOC106561553
Hepatocyte growth factor receptor-like.
    
 0.669
LOC106582868
Macrophage-stimulating protein receptor-like.
    
 0.669
LOC106609762
plexin-A4-like.
    
 0.545
PLXND1
plexin-D1-like.
    
 0.545
ENSSSAP00000025008
annotation not available
    
 0.545
plxna1
plexin-A1 isoform X2.
    
0.545
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.