STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106599747ranBP-type and C3HC4-type zinc finger-containing protein 1-like isoform X1. (437 aa)    
Predicted Functional Partners:
ub7i3
ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1.
   
0.998
LOC106590417
ranBP-type and C3HC4-type zinc finger-containing protein 1-like isoform X1.
  
0.998
LOC106599357
E3 ubiquitin-protein ligase RNF31-like isoform X1.
    
 0.996
LOC106569248
E3 ubiquitin-protein ligase RNF31-like isoform X1.
    
 0.996
LOC106579548
E3 ubiquitin-protein ligase RNF31-like.
    
 0.996
LOC106590402
E3 ubiquitin-protein ligase RNF31-like.
    
 0.996
LOC106592447
NF-kappa-B essential modulator-like.
    
 0.990
LOC106579568
ranBP-type and C3HC4-type zinc finger-containing protein 1-like.
  
0.983
LOC106575188
Tumor necrosis factor receptor superfamily member 1A-like.
    
 0.967
tnr1a
Tumor necrosis factor receptor superfamily member 1A precursor.
    
 0.967
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.