STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106604448ETS-related transcription factor Elf-1-like isoform X4. (646 aa)    
Predicted Functional Partners:
guf1
Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.
      
 0.601
LOC106560844
Core-binding factor subunit beta-like.
   
 
 0.549
LOC106573726
Core-binding factor subunit beta isoform X1.
   
 
 0.549
med23
Mediator of RNA polymerase II transcription subunit 23 isoform X4.
   
 
 0.511
LOC106579491
Runt-related transcription factor.
    
 0.504
LOC106610817
Runt-related transcription factor.
    
 0.504
runx2
Runt-related transcription factor 2.
    
 0.476
LOC100286411
Runt-related transcription factor.
    
 0.476
LOC106595378
Runt-related transcription factor.
    
 0.476
LOC106592413
Runt-related transcription factor 2-like.
    
 0.476
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.