STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106606136Src-like-adapter isoform X1. (307 aa)    
Predicted Functional Partners:
klhl6
Kelch-like protein 6.
   
 0.701
MIB2
E3 ubiquitin-protein ligase MIB2-like isoform X1.
   
 0.666
LOC106566874
E3 ubiquitin-protein ligase MIB2-like.
   
 0.666
spd2b
SH3 and PX domain-containing protein 2B isoform X3.
    
 0.604
sia7f
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6; Belongs to the glycosyltransferase 29 family.
      
 0.579
LOC106562229
Tumor necrosis factor receptor type 1-associated DEATH domain protein-like.
    
 0.563
LOC106587422
Tumor necrosis factor receptor type 1-associated DEATH domain protein.
    
 0.563
CD3Z
T-cell surface glycoprotein CD3 zeta chain.
   
 0.558
cd3z
T-cell surface glycoprotein CD3 zeta chain.
   
 0.558
LOC106606575
Baculoviral IAP repeat-containing protein 6-like isoform X14.
   
 0.551
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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