STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106602338ATP-binding cassette sub-family G member 2-like. (520 aa)    
Predicted Functional Partners:
abcg5
ATP-binding cassette sub-family G member 5.
   
0.927
abcg2
ATP-binding cassette sub-family G member 2 isoform X1.
  
  
 
0.901
abcc2
Canalicular multispecific organic anion transporter 1.
  
 0.841
LOC106604458
Cytochrome c oxidase assembly protein COX15 homolog.
    
 0.589
atp5f1c
ATP synthase subunit gamma.
   
   0.588
LOC106576202
ATP synthase subunit gamma.
   
   0.588
LOC106570039
Borealin-like isoform X1.
   
 
 0.568
borea
Borealin.
   
 
 0.568
LOC106613062
Uncharacterized protein LOC106613062.
   
 
 0.553
LOC106573602
ATP synthase subunit delta, mitochondrial-like.
   
   0.551
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.