STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106601545TBC1 domain family member 17-like. (658 aa)    
Predicted Functional Partners:
LOC106579849
Ras-related protein Rab-7a-like.
    
 0.948
LOC106563067
Ras-related protein Rab-7a-like.
    
 0.948
LOC106583206
Ras-related protein Rab-7a-like isoform X1.
    
 0.948
RAB7A
Ras-related protein Rab-7a-like.
    
 0.948
fis1
Mitochondrial fission 1 protein isoform X1.
    
 0.926
LOC106608767
Mitochondrial fission 1 protein-like.
    
 0.926
LOC106577644
Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.
    
 0.926
ENSSSAP00000022196
TBC1 domain family member 15.
  
  
0.912
LOC106594572
TBC1 domain family member 15-like.
     
 0.911
LOC106606880
TBC1 domain family member 17-like.
  
  
 
0.900
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.