STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
l3mbtl2Lethal(3)malignant brain tumor-like protein 2 isoform X1. (855 aa)    
Predicted Functional Partners:
e2f6
Transcription factor E2F6 isoform X1.
    
 0.957
RNF2
E3 ubiquitin-protein ligase RING2-like isoform X1.
    
 0.949
rng2a
E3 ubiquitin-protein ligase RING2-A.
    
 0.949
YY1-2
Transcriptional repressor protein YY1-like isoform X2.
    
 0.944
YY1-3
Transcriptional repressor protein YY1-like.
    
 0.944
YAF2
YY1-associated factor 2.
    
 0.940
RING1
E3 ubiquitin-protein ligase RING2-A-like isoform X2.
    
 0.939
LOC106563227-2
WD repeat-containing protein 5.
    
 
 0.935
YY1
Transcriptional repressor protein YY1-like isoform X3.
    
 0.928
pcgf6
Polycomb group RING finger protein 6.
    
 0.924
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.