STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106599051Retinol-binding protein 1-like; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (137 aa)    
Predicted Functional Partners:
stra6
Stimulated by retinoic acid gene 6 protein homolog.
     
 0.814
LOC106587923
Stimulated by retinoic acid gene 6 protein homolog.
     
 0.814
ENSSSAP00000049437
annotation not available
   
 
 0.714
ttr
Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain.
   
 
 0.714
LOC106609867
Lecithin retinol acyltransferase-like.
     
 0.711
ENSSSAP00000032145
annotation not available
     
 0.711
LOC106578982
Retinol-binding protein 4-B; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.694
rbp4
Retinol-binding protein 4 isoform X1; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.694
ENSSSAP00000007874
Lecithin retinol acyltransferase b, tandem duplicate 1.
     
 0.655
lrat
Lecithin Retinol acyltransferase.
     
 0.655
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
Server load: low (16%) [HD]