STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106600848Membrane progestin receptor beta-like. (347 aa)    
Predicted Functional Partners:
gpn1
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
      
 0.719
LOC106611173
Ral GTPase-activating protein subunit alpha-1-like isoform X4.
      
 0.679
ralgapa1
Ral GTPase-activating protein subunit alpha-1 isoform X1.
      
 0.679
LOC106560445
Breast cancer metastasis-suppressor 1 homolog isoform X2.
      
 0.660
INSM2
INSM transcriptional repressor 2.
      
 0.659
insm2
Insulinoma-associated protein 2.
      
 0.659
adipoq
Adiponectin.
     
 0.653
LOC106571034
Stathmin-4-like.
    
 
 0.649
khk
Ketohexokinase isoform X1.
      
 0.638
elp3
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
      
 0.626
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.