STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106585074Potassium voltage-gated channel subfamily H member 1-like isoform X2. (987 aa)    
Predicted Functional Partners:
LOC106603097
Voltage-gated potassium channel subunit beta-3-like isoform X4.
    
 0.712
kcnab2
Voltage-gated potassium channel subunit beta-2 isoform X1.
    
 0.712
ENSSSAP00000074558
Potassium voltage-gated channel, shaker-related subfamily, beta member 2 a.
    
 0.712
ENSSSAP00000074813
Potassium voltage-gated channel, shaker-related subfamily, beta member 1 a.
    
 0.712
LOC106600589
Voltage-gated potassium channel subunit beta-1-like.
    
 0.712
LOC106613256
Voltage-gated potassium channel subunit beta-1.
    
 0.712
LOC106582955
Voltage-gated potassium channel subunit beta-2 isoform X1.
    
 0.712
KCNAB3
Voltage-gated potassium channel subunit beta-3-like.
    
 0.712
dkga
2,5-diketo-D-gluconic acid reductase A isoform X1.
    
  0.584
LOC100194670
Aldo-keto reductase family 7 member A5-like.
    
  0.584
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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