STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cssa05h11orf80Uncharacterized protein C11orf80 homolog. (310 aa)    
Predicted Functional Partners:
ENSSSAP00000028630
annotation not available
    
 
 0.639
LOC106566748
Meiotic recombination protein SPO11-like isoform X2.
    
 
 0.639
LOC106562128
Meiotic recombination protein REC114-like.
      
 0.601
ccdc36
Coiled-coil domain-containing protein 36.
      
 0.601
syce1
Synaptonemal complex central element protein 1.
  
   
 0.463
LOC106562161
Ankyrin repeat domain-containing protein 11-like isoform X1.
      
 0.454
mei4
Meiosis-specific protein MEI4-like.
      
 0.450
sycp2l
Synaptonemal complex protein 2-like isoform X2.
      
 0.424
LOC106612627
Bifunctional polynucleotide phosphatase/kinase-like.
      
 0.418
ENSSSAP00000048205
annotation not available
      
 0.418
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.