STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl1860S ribosomal protein L18. (188 aa)    
Predicted Functional Partners:
RL39
60S ribosomal protein L39.
  
 0.999
LOC106605681
40S ribosomal protein S19.
   
 
 0.999
LOC106610677
60S ribosomal protein L13a-like; Belongs to the universal ribosomal protein uL13 family.
  
 0.999
rps9
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 
 0.999
rs8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 
 0.999
LOC106563677
60S ribosomal protein L17-like.
  
 0.999
RL23A
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 0.999
rl4a
60S ribosomal protein L4-A.
  
 0.999
rps9-2
Ribosomal protein S9.
  
 
 0.999
LOC106584615
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
  
 0.999
Your Current Organism:
Salmo salar
NCBI taxonomy Id: 8030
Other names: Atlantic salmon, S. salar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.